SURF: integrative analysis of a compendium of RNA-seq and CLIP-seq datasets highlights complex governing of alternative transcriptional regulation by RNA-binding proteins | Genome Biology | Full Text
Improving CLIP-seq data analysis by incorporating transcript information | BMC Genomics | Full Text
RNA binding protein mapping: RIP, CLIP, HITS-CLIP, PAR-CLIP
iCLIP_pipeline.jpg
Cross-linking immunoprecipitation - Wikipedia
Cross-Linking and Immunoprecipitation (CLIP) - Creative Diagnostics
CLIP and complementary methods | Nature Reviews Methods Primers
Crosslinking and ImmunoPrecipitation (CLIP) - Creative BioMart
Identification of CELF1 RNA targets by CLIP-seq in human HeLa cells - ScienceDirect
CLIP-Seq Service - Profacgen
LIN28A Is a Suppressor of ER-Associated Translation in Embryonic Stem Cells: Cell
CLIP-Seq Service - Creative BioMart
Pipeline for extracting MIWI CLIP-Seq features (see Section 2). The RNA... | Download Scientific Diagram
Crosslinking and Immunoprecipitation Followed by Sequencing — XRNAX
iCLIP data analysis: A complete pipeline from sequencing reads to RBP binding sites - ScienceDirect
MPs | Free Full-Text | Studying miRNA–mRNA Interactions: An Optimized CLIP-Protocol for Endogenous Ago2-Protein
RBP-eCLIP Kit: Enhanced CLIP-Seq for RBP Targets • NUCLEUS BIOTECH
CLIP-Seq | RNA-Seq Blog
Computational approaches for the analysis of RNA∓protein interactions: A primer for biologists
Cross-linking immunoprecipitation - Wikipedia
Bioinformatic tools for analysis of CLIP ribonucleoprotein data - De - 2017 - WIREs RNA - Wiley Online Library
Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of QSOX1 mRNA | Journal of the American Chemical Society
Research | Vourekas Lab
nearBynding: A flexible pipeline characterizing protein binding to local RNA structure | bioRxiv